Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate hydratase fumd | E5P00_17570 | Not Available | Positive | 3579528 - 3579737 | 7907.85 |
| is1 family transposase | E5P00_17575 | Not Available | Negative | 3579901 - 3579971 | 2385.83 |
| mfs transporter | E5P00_17585 | Not Available | Negative | 3580444 - 3581709 | 46407.0 |
| hypothetical protein | E5P00_17590 | Not Available | Negative | 3581811 - 3582791 | 37023.1 |
| utra domain-containing protein | E5P00_17595 | Not Available | Negative | 3582799 - 3583509 | 26940.3 |
| ribosome-dependent gtpase typa | E5P00_17600 | Not Available | Negative | 3583726 - 3585549 | 67359.5 |
| glutamate--ammonia ligase | E5P00_17605 | Not Available | Positive | 3585946 - 3587331 | 51037.6 |
| nitrogen regulation protein nr(ii) | E5P00_17610 | Not Available | Positive | 3587617 - 3588666 | 38558.5 |
| nitrogen regulation protein nr(i) | E5P00_17615 | Not Available | Positive | 3588678 - 3590087 | 52257.9 |
| hypothetical protein | E5P00_17620 | Not Available | Positive | 3590199 - 3590309 | 3618.45 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





