Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | E5P00_17465 | Not Available | Negative | 3556322 - 3557473 | 43004.6 |
| acetate coa-transferase ydif | E5P00_17470 | Not Available | Negative | 3557487 - 3559082 | 57565.7 |
| type i 3-dehydroquinate dehydratase | E5P00_17475 | Not Available | Negative | 3559225 - 3559983 | 27468.2 |
| quinate/shikimate dehydrogenase | E5P00_17480 | Not Available | Negative | 3560014 - 3560880 | 31229.6 |
| mfs transporter | E5P00_17485 | Not Available | Negative | 3560892 - 3562157 | 46099.1 |
| mfs transporter | E5P00_17490 | Not Available | Negative | 3562384 - 3563598 | 44544.6 |
| duf1870 family protein | E5P00_17495 | Not Available | Negative | 3563698 - 3564054 | 13929.7 |
| ai-2e family transporter ydik | E5P00_17505 | Not Available | Negative | 3564483 - 3565595 | 39843.7 |
| fad-binding oxidoreductase | E5P00_17510 | Not Available | Positive | 3565984 - 3569040 | 113255.0 |
| 1,4-dihydroxy-2-naphthoyl-coa hydrolase | E5P00_17515 | Not Available | Positive | 3569037 - 3569447 | 14976.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





