Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidylate kinase | E5P00_17365 | Not Available | Positive | 3534122 - 3534835 | 26378.3 |
| hypothetical protein | E5P00_17370 | Not Available | Positive | 3534867 - 3535625 | 28153.2 |
| lipopolysaccharide biosynthesis protein | E5P00_17375 | Not Available | Positive | 3535671 - 3537020 | 48622.0 |
| hypothetical protein | E5P00_17380 | Not Available | Positive | 3537020 - 3537844 | 32066.7 |
| ytfj family protein | E5P00_17385 | Not Available | Positive | 3537856 - 3538416 | 20716.1 |
| lps export abc transporter permease lptf | E5P00_17390 | Not Available | Positive | 3538447 - 3539517 | 39924.2 |
| lps export abc transporter permease lptg | E5P00_17395 | Not Available | Positive | 3539514 - 3540593 | 39788.5 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | E5P00_17400 | Not Available | Negative | 3540628 - 3541800 | 41729.0 |
| acyl carrier protein | E5P00_17405 | Not Available | Negative | 3541800 - 3542048 | 9417.69 |
| nad-dependent epimerase/dehydratase family protein | E5P00_17410 | Not Available | Negative | 3542080 - 3542994 | 33498.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





