Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integration host factor subunit alpha | E5P00_17265 | Not Available | Positive | 3514742 - 3515041 | 11354.6 |
| vitamin b12 abc transporter permease btuc | E5P00_17270 | Not Available | Positive | 3515142 - 3516122 | 34951.5 |
| glutathione peroxidase | E5P00_17275 | Not Available | Positive | 3516185 - 3516736 | 20470.7 |
| vitamin b12 abc transporter atp-binding protein btud | E5P00_17280 | Not Available | Positive | 3516736 - 3517485 | 27113.0 |
| endopeptidase | E5P00_17285 | Not Available | Positive | 3517563 - 3518027 | 17283.7 |
| anti-flhdc factor | E5P00_17290 | Not Available | Positive | 3518274 - 3518987 | 27033.8 |
| ydiu family protein | E5P00_17295 | Not Available | Positive | 3519050 - 3520486 | 54435.2 |
| hemin uptake protein hemp | E5P00_17300 | Not Available | Negative | 3520490 - 3520681 | 7117.58 |
| 3-deoxy-7-phosphoheptulonate synthase aroh | E5P00_17305 | Not Available | Negative | 3520813 - 3521859 | 38737.3 |
| posphoenolpyruvate synthetase regulatory kinase/phosphorylase ppsr | E5P00_17310 | Not Available | Negative | 3522016 - 3522849 | 31212.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





