Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease i | E5P00_17110 | Not Available | Positive | 3487498 - 3488925 | 54531.7 |
| hypothetical protein | E5P00_17115 | Not Available | Negative | 3488968 - 3489195 | 8092.61 |
| yeee/yede family protein | E5P00_17120 | Not Available | Negative | 3489209 - 3490267 | 38102.7 |
| putrescine/proton symporter plap | E5P00_17125 | Not Available | Negative | 3490446 - 3491804 | 49540.5 |
| membrane protein yoei | E5P00_17130 | Not Available | Negative | 3491794 - 3491856 | 2241.66 |
| lysr family transcriptional regulator | E5P00_17135 | Not Available | Negative | 3492071 - 3493000 | 34171.0 |
| sdr family oxidoreductase | E5P00_17140 | Not Available | Negative | 3493046 - 3493870 | 29681.7 |
| txe/yoeb family addiction module toxin | E5P00_17145 | Not Available | Negative | 3493953 - 3494207 | 10216.1 |
| yoeb-yefm toxin-antitoxin system antitoxin yefm | E5P00_17150 | Not Available | Negative | 3494204 - 3494455 | 9308.13 |
| his operon leader peptide | E5P00_17155 | Not Available | Positive | 3494738 - 3494785 | 1944.28 |
Pathways
1374 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





