Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translesion error-prone dna polymerase v subunit umuc | E5P00_16890 | Not Available | Positive | 3442612 - 3443880 | 47682.4 |
| disulfide bond formation protein dsbb | E5P00_16895 | Not Available | Negative | 3443926 - 3444456 | 20143.3 |
| na(+)/h(+) antiporter nhab | E5P00_16900 | Not Available | Negative | 3444602 - 3446143 | 56731.8 |
| fatty acid metabolism transcriptional regulator fadr | E5P00_16905 | Not Available | Positive | 3446364 - 3447083 | 26970.2 |
| spovr family protein | E5P00_16910 | Not Available | Negative | 3447135 - 3448667 | 60817.1 |
| d-amino acid dehydrogenase | E5P00_16915 | Not Available | Positive | 3448997 - 3450295 | 47610.1 |
| alanine racemase | E5P00_16920 | Not Available | Positive | 3450305 - 3451375 | 38846.9 |
| potassium/proton antiporter | E5P00_16925 | Not Available | Negative | 3451761 - 3453497 | 62289.2 |
| muramoyltetrapeptide carboxypeptidase | E5P00_16930 | Not Available | Negative | 3453592 - 3454506 | 33569.5 |
| membrane-bound lytic murein transglycosylase emta | E5P00_16935 | Not Available | Positive | 3454606 - 3455217 | 22227.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





