Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase srmb | E5P00_16725 | Not Available | Negative | 3417131 - 3418465 | 49901.0 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase | E5P00_16730 | Not Available | Positive | 3418597 - 3419334 | 27271.4 |
| l-aspartate oxidase | E5P00_16735 | Not Available | Negative | 3419319 - 3420941 | 60340.9 |
| rpoe leader peptide rsed | E5P00_16740 | Not Available | Positive | 3421197 - 3421352 | 6229.83 |
| rna polymerase sigma factor rpoe | E5P00_16745 | Not Available | Positive | 3421349 - 3421924 | 21697.0 |
| anti-sigma-e factor rsea | E5P00_16750 | Not Available | Positive | 3421957 - 3422607 | 24322.8 |
| sigma-e factor regulatory protein rseb | E5P00_16755 | Not Available | Positive | 3422607 - 3423563 | 35751.8 |
| soxr-reducing system protein rsec | E5P00_16760 | Not Available | Positive | 3423560 - 3424039 | 16640.3 |
| elongation factor 4 | E5P00_16765 | Not Available | Positive | 3424237 - 3426036 | 66574.1 |
| signal peptidase i | E5P00_16770 | Not Available | Positive | 3426052 - 3427026 | 35962.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





