Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit alpha | E5P00_16520 | Not Available | Negative | 3389789 - 3390778 | 36513.9 |
| 30s ribosomal protein s4 | E5P00_16525 | Not Available | Negative | 3390804 - 3391424 | 23470.5 |
| 30s ribosomal protein s11 | E5P00_16530 | Not Available | Negative | 3391458 - 3391847 | 13845.7 |
| 30s ribosomal protein s13 | E5P00_16535 | Not Available | Negative | 3391864 - 3392220 | 13100.2 |
| 50s ribosomal protein l36 | E5P00_16540 | Not Available | Negative | 3392367 - 3392483 | 4364.59 |
| preprotein translocase subunit secy | E5P00_16545 | Not Available | Negative | 3392515 - 3393846 | 48514.7 |
| 50s ribosomal protein l15 | E5P00_16550 | Not Available | Negative | 3393854 - 3394288 | 14981.4 |
| 50s ribosomal protein l30 | E5P00_16555 | Not Available | Negative | 3394292 - 3394471 | 6542.23 |
| 30s ribosomal protein s5 | E5P00_16560 | Not Available | Negative | 3394475 - 3394978 | 17604.5 |
| 50s ribosomal protein l18 | E5P00_16565 | Not Available | Negative | 3394993 - 3395346 | 12770.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





