Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannitol-1-phosphate 5-dehydrogenase | E5P00_16420 | Not Available | Negative | 3372938 - 3374086 | 41126.4 |
| pts mannitol transporter subunit iicba | E5P00_16425 | Not Available | Negative | 3374316 - 3376229 | 68004.5 |
| duf3302 domain-containing protein | E5P00_16430 | Not Available | Positive | 3376766 - 3377128 | 13866.8 |
| hlyd family secretion protein | E5P00_16435 | Not Available | Positive | 3377131 - 3378267 | 41990.8 |
| gamma carbonic anhydrase family protein | E5P00_16440 | Not Available | Positive | 3378985 - 3379539 | 20246.3 |
| duf1488 domain-containing protein | E5P00_16445 | Not Available | Negative | 3379515 - 3379772 | 10007.5 |
| shikimate dehydrogenase | E5P00_16450 | Not Available | Negative | 3379769 - 3380587 | 29415.3 |
| l-threonylcarbamoyladenylate synthase type 1 tsac | E5P00_16455 | Not Available | Negative | 3380592 - 3381164 | 20768.9 |
| hypothetical protein | E5P00_16460 | Not Available | Negative | 3381169 - 3381711 | 19872.0 |
| duf494 domain-containing protein | E5P00_16465 | Not Available | Negative | 3381740 - 3382213 | 18511.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





