Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-export chaperone secb | E5P00_16370 | Not Available | Positive | 3364382 - 3364849 | 17278.3 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | E5P00_16375 | Not Available | Positive | 3364849 - 3365868 | 36363.8 |
| serine o-acetyltransferase | E5P00_16380 | Not Available | Positive | 3365948 - 3366769 | 29318.4 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | E5P00_16385 | Not Available | Negative | 3366822 - 3367295 | 17727.3 |
| quinone-dependent l-lactate dehydrogenase | E5P00_16390 | Not Available | Negative | 3367493 - 3368683 | 42730.7 |
| transcriptional regulator lldr | E5P00_16395 | Not Available | Negative | 3368680 - 3369456 | 29167.9 |
| l-lactate permease | E5P00_16400 | Not Available | Negative | 3369456 - 3371111 | 59171.5 |
| yibl family ribosome-associated protein | E5P00_16405 | Not Available | Negative | 3371483 - 3371845 | 13696.8 |
| hypothetical protein | E5P00_16410 | Not Available | Positive | 3372130 - 3372339 | 7995.76 |
| transcriptional repressor mtlr | E5P00_16415 | Not Available | Negative | 3372351 - 3372938 | 21991.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





