Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent protein deacylase | E5P00_16215 | Not Available | Positive | 3334209 - 3335048 | 31465.9 |
| tpm domain-containing protein | E5P00_16220 | Not Available | Negative | 3335168 - 3335956 | 28866.5 |
| duf3592 domain-containing protein | E5P00_16225 | Not Available | Negative | 3335953 - 3336414 | 17390.8 |
| spermidine/putrescine abc transporter substrate-binding protein potd | E5P00_16230 | Not Available | Negative | 3336472 - 3337518 | 38869.1 |
| spermidine/putrescine abc transporter permease potc | E5P00_16235 | Not Available | Negative | 3337515 - 3338309 | 29112.7 |
| spermidine/putrescine abc transporter permease potb | E5P00_16240 | Not Available | Negative | 3338306 - 3339163 | 32210.3 |
| spermidine/putrescine abc transporter atp-binding protein pota | E5P00_16245 | Not Available | Negative | 3339147 - 3340283 | 43030.8 |
| peptidase t | E5P00_16250 | Not Available | Positive | 3340533 - 3341759 | 44926.1 |
| cupin domain-containing protein | E5P00_16255 | Not Available | Negative | 3341808 - 3342929 | 42581.2 |
| two-component system sensor histidine kinase phoq | E5P00_16260 | Not Available | Negative | 3343005 - 3344465 | 55302.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





