Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| colanic acid biosynthesis glycosyltransferase wcae | E5P00_16015 | Not Available | Negative | 3286732 - 3287478 | 27907.5 |
| putative colanic acid polymerase wcad | E5P00_16020 | Not Available | Negative | 3287489 - 3288706 | 45402.1 |
| colanic acid biosynthesis glycosyltransferase wcac | E5P00_16025 | Not Available | Negative | 3288681 - 3289898 | 45207.5 |
| colanic acid biosynthesis acetyltransferase wcab | E5P00_16030 | Not Available | Negative | 3289895 - 3290383 | 17616.6 |
| colanic acid biosynthesis glycosyltransferase wcaa | E5P00_16035 | Not Available | Negative | 3290386 - 3291225 | 33037.5 |
| tyrosine-protein kinase wzc | E5P00_16040 | Not Available | Negative | 3291403 - 3293565 | 79386.8 |
| low molecular weight protein-tyrosine-phosphatase wzb | E5P00_16045 | Not Available | Negative | 3293568 - 3294011 | 16710.2 |
| polysaccharide export protein | E5P00_16050 | Not Available | Negative | 3294017 - 3295156 | 41912.4 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | E5P00_16055 | Not Available | Negative | 3295792 - 3299316 | 128848.0 |
| duf333 domain-containing protein | E5P00_16060 | Not Available | Positive | 3299590 - 3299856 | 8696.44 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





