Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate dehydrogenase | E5P00_00855 | Not Available | Negative | 167545 - 169020 | 55691.5 |
| murr/rpir family transcriptional regulator | E5P00_00860 | Not Available | Positive | 169358 - 170227 | 31977.4 |
| pyruvate kinase | E5P00_00865 | Not Available | Positive | 170355 - 171797 | 51342.2 |
| lauroyl-kdo(2)-lipid iv(a) myristoyltransferase | E5P00_00870 | Not Available | Negative | 171928 - 172899 | 37412.5 |
| murein dd-endopeptidase mepm | E5P00_00875 | Not Available | Negative | 173019 - 174341 | 49060.6 |
| zinc abc transporter substrate-binding protein znua | E5P00_00880 | Not Available | Negative | 174357 - 175289 | 33851.3 |
| zinc abc transporter atp-binding protein znuc | E5P00_00885 | Not Available | Positive | 175368 - 176123 | 27869.3 |
| zinc abc transporter permease subunit znub | E5P00_00890 | Not Available | Positive | 176120 - 176905 | 27778.5 |
| holliday junction branch migration dna helicase ruvb | E5P00_00895 | Not Available | Negative | 177052 - 178062 | 37176.0 |
| holliday junction branch migration protein ruva | E5P00_00900 | Not Available | Negative | 178071 - 178682 | 22087.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





