Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 3245407 - 3245483 | Not Available |
| fimbriae biosynthesis transcriptional regulator fimz | E5P00_15815 | Not Available | Positive | 3245726 - 3246358 | 23678.9 |
| fimbriae assembly protein | E5P00_15820 | Not Available | Negative | 3246361 - 3246876 | 18221.7 |
| type 1 fimbrin d-mannose specific adhesin fimh | E5P00_15825 | Not Available | Negative | 3246887 - 3247927 | 37986.7 |
| fimbrial biogenesis outer membrane usher protein | E5P00_15830 | Not Available | Negative | 3247906 - 3250515 | 96044.6 |
| molecular chaperone fimc | E5P00_15835 | Not Available | Negative | 3250546 - 3251238 | 25445.1 |
| type 1 fimbrial protein subunit fima | E5P00_15840 | Not Available | Negative | 3251458 - 3252000 | 18475.5 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | E5P00_15845 | Not Available | Positive | 3252471 - 3253337 | 31045.6 |
| ribosome-associated protein ybcj | E5P00_15850 | Not Available | Positive | 3253339 - 3253551 | 7389.95 |
| metal-dependent hydrolase | E5P00_15855 | Not Available | Positive | 3253659 - 3254180 | 19457.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





