Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3300 domain-containing protein | E5P00_15760 | Not Available | Positive | 3228184 - 3230037 | 69418.8 |
| dihydrolipoyl dehydrogenase | E5P00_15765 | Not Available | Negative | 3230108 - 3231532 | 50691.4 |
| pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | E5P00_15770 | Not Available | Negative | 3231857 - 3233749 | 66099.8 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | E5P00_15775 | Not Available | Negative | 3233764 - 3236427 | 99674.1 |
| pyruvate dehydrogenase complex transcriptional repressor pdhr | E5P00_15780 | Not Available | Negative | 3236588 - 3237352 | 29427.2 |
| isas1 family transposase | E5P00_15785 | Not Available | Positive | 3237566 - 3238059 | 18801.6 |
| phage adsorption protein nrfb | E5P00_15790 | Not Available | Positive | 3238330 - 3240567 | 85324.3 |
| phage receptor | E5P00_15795 | Not Available | Positive | 3240554 - 3243526 | 111359.0 |
| duf4434 family protein | E5P00_15800 | Not Available | Positive | 3243527 - 3244417 | 33076.5 |
| arac family transcriptional regulator | E5P00_15805 | Not Available | Positive | 3244600 - 3245361 | 28991.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





