Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin-guanine dinucleotide biosynthesis protein mobc | E5P00_15605 | Not Available | Negative | 3195829 - 3196164 | 12522.9 |
| nika protein | E5P00_15610 | Not Available | Positive | 3196397 - 3196729 | 12731.3 |
| relaxase nikb | E5P00_15615 | Not Available | Positive | 3196741 - 3199452 | 104460.0 |
| conjugal transfer protein trbc | E5P00_15625 | Not Available | Negative | 3199846 - 3202149 | 87196.3 |
| dsbc family protein | E5P00_15630 | Not Available | Negative | 3202130 - 3203254 | 40928.5 |
| conjugal transfer protein trba | E5P00_15635 | Not Available | Negative | 3203251 - 3204540 | 49304.4 |
| hypothetical protein | E5P00_15640 | Not Available | Negative | 3205353 - 3205538 | 6707.24 |
| hypothetical protein | E5P00_15645 | Not Available | Positive | 3205604 - 3205855 | 8765.93 |
| thermonuclease | E5P00_15650 | Not Available | Negative | 3206243 - 3206710 | 17823.4 |
| dna-binding protein | E5P00_15655 | Not Available | Positive | 3206869 - 3207492 | 23825.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





