Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | E5P00_15355 | Not Available | Negative | 3154945 - 3155967 | 37347.3 |
| abc transporter substrate-binding protein | E5P00_15360 | Not Available | Negative | 3155969 - 3157519 | 57644.2 |
| d-alanyl-d-alanine dipeptidase | E5P00_15365 | Not Available | Negative | 3157533 - 3158114 | 21244.2 |
| oxygen-sensing cyclic-di-gmp phosphodiesterase | E5P00_15370 | Not Available | Negative | 3158372 - 3160771 | 90265.6 |
| diguanylate cyclase dosc | E5P00_15375 | Not Available | Negative | 3160796 - 3162178 | 53180.7 |
| glycoside hydrolase family 10 protein | E5P00_15380 | Not Available | Negative | 3162542 - 3163861 | 49576.9 |
| acid resistance gamma-aminobutyrate antiporter gadc | E5P00_15385 | Not Available | Negative | 3163992 - 3165527 | 55080.0 |
| glutamate decarboxylase | E5P00_15390 | Not Available | Negative | 3165683 - 3167083 | 52701.0 |
| insulinase family protein | E5P00_15395 | Not Available | Negative | 3167445 - 3170240 | 104687.0 |
| tonb-dependent receptor | E5P00_15400 | Not Available | Negative | 3170285 - 3172657 | 89166.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





