Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E5P00_14995 | Not Available | Negative | 3085406 - 3085774 | 14352.2 |
| hypothetical protein | E5P00_15000 | Not Available | Negative | 3085786 - 3085977 | 7065.7 |
| hypothetical protein | E5P00_15005 | Not Available | Negative | 3086073 - 3086315 | 8812.88 |
| hok/gef family protein | E5P00_15010 | Not Available | Positive | 3086646 - 3086798 | 5766.37 |
| rna polymerase subunit sigma | E5P00_15020 | Not Available | Negative | 3086937 - 3088523 | 61021.2 |
| ethanolamine utilization protein eute | E5P00_15025 | Not Available | Negative | 3088795 - 3089445 | 25104.6 |
| hypothetical protein | E5P00_15030 | Not Available | Negative | 3089534 - 3091699 | 77099.5 |
| conjugal transfer protein trax | E5P00_15035 | Not Available | Negative | 3091773 - 3092342 | 22201.5 |
| conjugal transfer protein | E5P00_15040 | Not Available | Negative | 3092339 - 3093427 | 38972.2 |
| conjugal transfer protein trav | E5P00_15045 | Not Available | Negative | 3093502 - 3094122 | 23495.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





