Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integration host factor subunit beta | E5P00_14890 | Not Available | Positive | 3059473 - 3059757 | 10651.8 |
| comec family protein | E5P00_14895 | Not Available | Positive | 3059965 - 3062229 | 84512.9 |
| lipid a export atp-binding/permease msba | E5P00_14900 | Not Available | Positive | 3062266 - 3064014 | 64464.6 |
| tetraacyldisaccharide 4'-kinase | E5P00_14905 | Not Available | Positive | 3064011 - 3064997 | 35591.4 |
| winged helix-turn-helix domain-containing protein | E5P00_14910 | Not Available | Positive | 3065034 - 3066266 | 47686.6 |
| protein ycar | E5P00_14915 | Not Available | Positive | 3066318 - 3066500 | 6855.35 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | E5P00_14920 | Not Available | Positive | 3066497 - 3067243 | 27616.0 |
| hypothetical protein | E5P00_14925 | Not Available | Positive | 3067397 - 3068290 | 34489.6 |
| envelope biogenesis factor elyc | E5P00_14930 | Not Available | Negative | 3068267 - 3069046 | 28668.0 |
| trna uridine 5-oxyacetic acid(34) methyltransferase cmom | E5P00_14935 | Not Available | Positive | 3069182 - 3069967 | 29816.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





