Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf domain-containing protein | E5P00_00755 | Not Available | Negative | 148337 - 148834 | 18080.5 |
| paraquat-inducible protein a | E5P00_00760 | Not Available | Positive | 148964 - 150247 | 48276.3 |
| pqib family protein | E5P00_00765 | Not Available | Positive | 150216 - 152849 | 94946.0 |
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | E5P00_00770 | Not Available | Positive | 152929 - 154368 | 53340.5 |
| duf1480 family protein | E5P00_00775 | Not Available | Positive | 154486 - 154722 | 8767.29 |
| duf1482 family protein | E5P00_00780 | Not Available | Positive | 154827 - 155018 | 7289.58 |
| protein-serine/threonine phosphatase | E5P00_00785 | Not Available | Negative | 155019 - 155675 | 25269.2 |
| duf2511 domain-containing protein | E5P00_00790 | Not Available | Negative | 156071 - 156412 | 12393.2 |
| copper homeostasis membrane protein copd | E5P00_00795 | Not Available | Negative | 156425 - 157297 | 32618.3 |
| copc domain-containing protein yoba | E5P00_00800 | Not Available | Negative | 157301 - 157675 | 13410.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





