Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna transporter hofq | E5P00_14525 | Not Available | Negative | 3004695 - 3005933 | 44718.9 |
| dna utilization protein hofp | E5P00_14530 | Not Available | Negative | 3005845 - 3006249 | 15099.1 |
| dna utilization protein hofo | E5P00_14535 | Not Available | Negative | 3006239 - 3006679 | 16877.1 |
| dna utilization protein hofn | E5P00_14540 | Not Available | Negative | 3006663 - 3007202 | 20797.1 |
| dna utilization protein hofm | E5P00_14545 | Not Available | Negative | 3007202 - 3007981 | 29001.8 |
| peptidoglycan glycosyltransferase/peptidoglycan dd-transpeptidase mrca | E5P00_14550 | Not Available | Positive | 3008101 - 3010653 | 93641.4 |
| adp compounds hydrolase nude | E5P00_14555 | Not Available | Negative | 3010819 - 3011379 | 21154.4 |
| intracellular growth attenuator protein igaa | E5P00_14560 | Not Available | Positive | 3011699 - 3013834 | 79494.4 |
| gmp/imp nucleotidase | E5P00_14565 | Not Available | Positive | 3013899 - 3014567 | 25400.2 |
| ribosome-associated heat shock protein hsp15 | E5P00_14570 | Not Available | Positive | 3014578 - 3014979 | 15496.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





