Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s16 | E5P00_14320 | Not Available | Negative | 2966064 - 2966312 | 9191.08 |
| signal recognition particle protein | E5P00_14325 | Not Available | Negative | 2966561 - 2967922 | 49790.5 |
| inner membrane protein ypjd | E5P00_14330 | Not Available | Positive | 2968089 - 2968880 | 29263.9 |
| duf21 domain-containing protein | E5P00_14335 | Not Available | Positive | 2968901 - 2970187 | 48047.2 |
| nucleotide exchange factor grpe | E5P00_14340 | Not Available | Negative | 2970242 - 2970835 | 21813.1 |
| molecular chaperone grpe | E5P00_14345 | Not Available | Negative | 2970832 - 2971026 | 7103.64 |
| nad(+) kinase | E5P00_14350 | Not Available | Positive | 2970958 - 2971836 | 32568.3 |
| dna repair protein recn | E5P00_14355 | Not Available | Positive | 2971922 - 2973583 | 61400.1 |
| outer membrane protein assembly factor bame | E5P00_14360 | Not Available | Positive | 2973732 - 2974073 | 12302.8 |
| rnfh family protein | E5P00_14365 | Not Available | Negative | 2974135 - 2974425 | 10790.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





