Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional chorismate mutase/prephenate dehydratase | E5P00_14270 | Not Available | Positive | 2957872 - 2959032 | 43113.9 |
| t-protein | E5P00_14275 | Not Available | Negative | 2959075 - 2960196 | 42045.0 |
| 3-deoxy-7-phosphoheptulonate synthase arof | E5P00_14280 | Not Available | Negative | 2960207 - 2961277 | 38806.2 |
| duf2799 domain-containing protein | E5P00_14285 | Not Available | Positive | 2961487 - 2961852 | 13204.3 |
| duf4154 domain-containing protein | E5P00_14290 | Not Available | Positive | 2962002 - 2962520 | 18979.2 |
| diguanylate cyclase dgcn | E5P00_14295 | Not Available | Positive | 2962510 - 2963736 | 45992.1 |
| ompa family protein | E5P00_14300 | Not Available | Positive | 2963752 - 2964234 | 17259.6 |
| 50s ribosomal protein l19 | E5P00_14305 | Not Available | Negative | 2964310 - 2964657 | 13134.0 |
| trna (guanosine(37)-n1)-methyltransferase trmd | E5P00_14310 | Not Available | Negative | 2964699 - 2965466 | 28424.0 |
| ribosome maturation factor rimm | E5P00_14315 | Not Available | Negative | 2965497 - 2966045 | 20606.6 |
Pathways
890 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





