Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yjjw family glycine radical enzyme activase | E5P00_14120 | Not Available | Negative | 2926297 - 2927160 | 31396.2 |
| yjji family glycine radical enzyme | E5P00_14125 | Not Available | Negative | 2927132 - 2928682 | 57999.3 |
| deoxyribose-phosphate aldolase | E5P00_14130 | Not Available | Positive | 2928940 - 2929719 | 27749.3 |
| thymidine phosphorylase | E5P00_14135 | Not Available | Positive | 2929846 - 2931168 | 47182.9 |
| phosphopentomutase | E5P00_14140 | Not Available | Positive | 2931220 - 2932443 | 44300.4 |
| purine-nucleoside phosphorylase | E5P00_14145 | Not Available | Positive | 2932523 - 2933242 | 25937.4 |
| xre family transcriptional regulator | E5P00_14150 | Not Available | Negative | 2933403 - 2933666 | 10008.5 |
| lipoate--protein ligase lpla | E5P00_14155 | Not Available | Negative | 2933698 - 2934714 | 37939.9 |
| ytjb family periplasmic protein | E5P00_14160 | Not Available | Negative | 2934742 - 2935386 | 24084.2 |
| phosphoserine phosphatase | E5P00_14165 | Not Available | Positive | 2935492 - 2936460 | 35074.8 |
Pathways
869 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





