Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 2917791 - 2917877 | Not Available |
| 16s rrna (guanine(1207)-n(2))-methyltransferase rsmc | E5P00_14075 | Not Available | Negative | 2918186 - 2919217 | 37612.8 |
| dna polymerase iii subunit psi | E5P00_14080 | Not Available | Positive | 2919320 - 2919733 | 15208.3 |
| ribosomal-protein-alanine n-acetyltransferase | E5P00_14085 | Not Available | Positive | 2919702 - 2920148 | 16610.7 |
| pyrimidine 5'-nucleotidase | E5P00_14090 | Not Available | Positive | 2920163 - 2920840 | 25278.9 |
| peptide chain release factor 3 | E5P00_14095 | Not Available | Positive | 2920931 - 2922520 | 59593.5 |
| molecular chaperone osmy | E5P00_14100 | Not Available | Positive | 2922913 - 2923518 | 21074.8 |
| duf1328 domain-containing protein | E5P00_14105 | Not Available | Positive | 2923627 - 2923806 | 6238.2 |
| patatin family protein | E5P00_14110 | Not Available | Positive | 2923928 - 2925001 | 39834.1 |
| metal-dependent hydrolase | E5P00_14115 | Not Available | Positive | 2924998 - 2925780 | 28962.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





