Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine decarboxylase cada | E5P00_13960 | Not Available | Negative | 2898534 - 2900681 | 81264.7 |
| cadaverine/lysine antiporter | E5P00_13965 | Not Available | Negative | 2900761 - 2902095 | 46667.8 |
| transcriptional regulator cadc | E5P00_13970 | Not Available | Negative | 2902460 - 2903998 | 57816.1 |
| Trna-phe | Not Available | Not Available | Positive | 2904615 - 2904690 | Not Available |
| transcriptional regulator | E5P00_13980 | Not Available | Negative | 2904797 - 2905372 | 21932.3 |
| protein-disulfide reductase dsbd | E5P00_13985 | Not Available | Negative | 2905409 - 2907106 | 61798.7 |
| divalent cation tolerance protein cuta | E5P00_13990 | Not Available | Negative | 2907082 - 2907420 | 12331.7 |
| anaerobic c4-dicarboxylate transporter | E5P00_13995 | Not Available | Negative | 2907536 - 2908837 | 45753.5 |
| aspartate ammonia-lyase | E5P00_14000 | Not Available | Negative | 2908955 - 2910391 | 52359.2 |
| membrane protein fxsa | E5P00_14005 | Not Available | Positive | 2910728 - 2911204 | 17693.1 |
Pathways
439 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





