Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i fumarate hydratase | E5P00_13910 | Not Available | Negative | 2887744 - 2889390 | 60108.7 |
| anaerobic c4-dicarboxylate transporter | E5P00_13915 | Not Available | Negative | 2889468 - 2890808 | 47938.2 |
| two-component system response regulator dcur | E5P00_13920 | Not Available | Negative | 2891379 - 2892098 | 27489.9 |
| two-component system sensor histidine kinase dcus | E5P00_13925 | Not Available | Negative | 2892095 - 2893726 | 60554.4 |
| 4fe-4s mono-cluster protein yjdi | E5P00_13930 | Not Available | Positive | 2893907 - 2894137 | 8550.35 |
| n-acetyltransferase | E5P00_13935 | Not Available | Positive | 2894149 - 2894421 | 10468.7 |
| type v toxin-antitoxin system endoribonuclease antitoxin ghos | E5P00_13940 | Not Available | Positive | 2894648 - 2894944 | 11468.6 |
| type v toxin-antitoxin system toxin ghot | E5P00_13945 | Not Available | Positive | 2894972 - 2895145 | 6555.44 |
| lysine--trna ligase | E5P00_13950 | Not Available | Negative | 2895264 - 2896781 | 57829.9 |
| dipeptide/tripeptide permease dtpc | E5P00_13955 | Not Available | Negative | 2897018 - 2898475 | 53057.8 |
Pathways
859 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





