Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylosuccinate synthase | E5P00_13655 | Not Available | Positive | 2837745 - 2839043 | 47347.7 |
| hth-type transcriptional repressor nsrr | E5P00_13660 | Not Available | Positive | 2839248 - 2839673 | 15594.0 |
| ribonuclease r | E5P00_13665 | Not Available | Positive | 2839712 - 2842153 | 92114.5 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | E5P00_13670 | Not Available | Positive | 2842333 - 2843064 | 26558.3 |
| duf2170 family protein | E5P00_13675 | Not Available | Positive | 2843190 - 2843383 | 7253.76 |
| hypothetical protein | E5P00_13680 | Not Available | Negative | 2843384 - 2843820 | 15210.3 |
| nickel-responsive transcriptional regulator nikr | E5P00_13685 | Not Available | Negative | 2844023 - 2844424 | 15094.7 |
| nickel import atp-binding protein nike | E5P00_13690 | Not Available | Negative | 2844430 - 2845236 | 29723.5 |
| nickel import atp-binding protein nikd | E5P00_13695 | Not Available | Negative | 2845233 - 2845997 | 26822.1 |
| nickel abc transporter permease subunit nikc | E5P00_13700 | Not Available | Negative | 2845997 - 2846830 | 30363.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





