Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quaternary ammonium compound-resistance protein suge | E5P00_13505 | Not Available | Positive | 2809933 - 2810250 | 10901.0 |
| outer membrane lipoprotein blc | E5P00_13510 | Not Available | Negative | 2810247 - 2810780 | 19924.7 |
| blaec family class c beta-lactamase | E5P00_13515 | Not Available | Negative | 2810869 - 2812002 | 41493.8 |
| fumarate reductase subunit frdd | E5P00_13520 | Not Available | Negative | 2812065 - 2812424 | 13107.8 |
| fumarate reductase subunit frdc | E5P00_13525 | Not Available | Negative | 2812435 - 2812830 | 15015.8 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | E5P00_13530 | Not Available | Negative | 2812841 - 2813575 | 27124.5 |
| fumarate reductase (quinol) flavoprotein subunit | E5P00_13535 | Not Available | Negative | 2813568 - 2815376 | 65991.5 |
| elongation factor p--(r)-beta-lysine ligase | E5P00_13540 | Not Available | Positive | 2815701 - 2816678 | 36978.1 |
| glutamate/gamma-aminobutyrate family transporter yjem | E5P00_13545 | Not Available | Positive | 2816897 - 2818399 | 54728.2 |
| hypothetical protein | E5P00_13550 | Not Available | Positive | 2818451 - 2818765 | 11819.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





