Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylulokinase | E5P00_13335 | Not Available | Negative | 2776528 - 2777982 | 52621.3 |
| xylose isomerase | E5P00_13340 | Not Available | Negative | 2778054 - 2779376 | 49744.7 |
| d-xylose-binding periplasmic protein | E5P00_13345 | Not Available | Positive | 2779742 - 2780734 | 35736.1 |
| d-xylose abc transporter atp-binding protein | E5P00_13350 | Not Available | Positive | 2780812 - 2782353 | 56459.9 |
| xylose abc transporter permease xylh | E5P00_13355 | Not Available | Positive | 2782331 - 2783512 | 41033.5 |
| xylose operon transcription regulator xylr | E5P00_13360 | Not Available | Positive | 2783590 - 2784768 | 44871.7 |
| protein bax | E5P00_13365 | Not Available | Negative | 2784964 - 2785788 | 30869.3 |
| alpha-amylase | E5P00_13370 | Not Available | Positive | 2786108 - 2788138 | 75716.5 |
| valine--pyruvate transaminase | E5P00_13375 | Not Available | Positive | 2788316 - 2789569 | 46714.9 |
| 4fe-4s dicluster domain-containing protein | E5P00_13380 | Not Available | Negative | 2789720 - 2790193 | 17460.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





