Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase fad-binding subunit xdhb | E5P00_00600 | Not Available | Negative | 119613 - 120491 | 31558.6 |
| xanthine dehydrogenase molybdenum-binding subunit xdha | E5P00_00605 | Not Available | Negative | 120502 - 122799 | 82663.0 |
| lysm peptidoglycan-binding domain-containing protein | E5P00_00610 | Not Available | Positive | 123214 - 123969 | 26566.1 |
| Trna-gly | Not Available | Not Available | Positive | 124048 - 124121 | Not Available |
| site-specific integrase | E5P00_00620 | Not Available | Positive | 124256 - 125872 | 60552.1 |
| duf4145 domain-containing protein | E5P00_00625 | Not Available | Positive | 125856 - 126509 | 24509.3 |
| is1 family transposase | E5P00_00630 | Not Available | Positive | 126885 - 126956 | 2385.83 |
| is1 family transposase | E5P00_00635 | Not Available | Positive | 126957 - 127068 | 4273.23 |
| yoah family protein | E5P00_00645 | Not Available | Negative | 127260 - 127439 | 6554.7 |
| aminodeoxychorismate synthase component 1 | E5P00_00650 | Not Available | Positive | 127513 - 128874 | 50956.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





