Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | E5P00_11810 | Not Available | Positive | 2443032 - 2444777 | 65568.5 |
| rna polymerase sigma factor rpod | E5P00_11815 | Not Available | Positive | 2444972 - 2446813 | 70241.3 |
| g/u mismatch-specific dna glycosylase | E5P00_11820 | Not Available | Negative | 2446892 - 2447398 | 18674.5 |
| Trna-met | Not Available | Not Available | Positive | 2447523 - 2447598 | Not Available |
| nadph-dependent ferric chelate reductase | E5P00_11830 | Not Available | Negative | 2447652 - 2448416 | 28873.1 |
| padr family transcriptional regulator | E5P00_11835 | Not Available | Positive | 2448704 - 2449327 | 23402.7 |
| pas domain s-box protein | E5P00_11840 | Not Available | Negative | 2449481 - 2451001 | 55069.0 |
| putrescine aminotransferase | E5P00_11845 | Not Available | Positive | 2451308 - 2452798 | 53913.5 |
| pp_02318 | E5P00_11850 | Not Available | Negative | 2452840 - 2453172 | Not Available |
| transcriptional regulator ebgr | E5P00_11855 | Not Available | Positive | 2453391 - 2454374 | 36212.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





