Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional nadp-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase ydfg | E5P00_10940 | Not Available | Positive | 2284931 - 2285677 | 27250.5 |
| gntr family transcriptional regulator | E5P00_10945 | Not Available | Positive | 2285766 - 2286452 | 26566.7 |
| putative selenium delivery protein ydfz | E5P00_10950 | Not Available | Positive | 2286629 - 2286832 | 7276.83 |
| mannitol dehydrogenase family protein | E5P00_10955 | Not Available | Negative | 2286867 - 2288327 | 53731.3 |
| mfs transporter | E5P00_10960 | Not Available | Negative | 2288416 - 2289699 | 46269.9 |
| hypothetical protein | E5P00_10965 | Not Available | Positive | 2290303 - 2290416 | 4013.06 |
| cold shock protein ydfk | E5P00_10970 | Not Available | Positive | 2290485 - 2290600 | 4407.45 |
| is1 family transposase | E5P00_10975 | Not Available | Positive | 2290601 - 2290712 | 4299.32 |
| duf805 domain-containing protein | E5P00_10980 | Not Available | Negative | 2290806 - 2291246 | 16542.6 |
| duf1454 family protein | E5P00_10985 | Not Available | Positive | 2291347 - 2291946 | 21706.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





