Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | E5P00_09355 | Not Available | Negative | 1929877 - 1930785 | 34296.3 |
| nad(p)h oxidoreductase | E5P00_09360 | Not Available | Positive | 1930885 - 1931475 | 23037.4 |
| pyruvate formate lyase 1-activating protein | E5P00_09365 | Not Available | Negative | 1931557 - 1932297 | 28205.9 |
| formate c-acetyltransferase | E5P00_09370 | Not Available | Negative | 1932489 - 1934771 | 85362.0 |
| formate transporter foca | E5P00_09375 | Not Available | Negative | 1934826 - 1935683 | 30992.6 |
| glutamate racemase | E5P00_09380 | Not Available | Negative | 1936224 - 1937081 | 31003.7 |
| tonb-dependent vitamin b12 receptor btub | E5P00_09385 | Not Available | Negative | 1937026 - 1938870 | 68410.7 |
| trna (uridine(54)-c5)-methyltransferase trma | E5P00_09390 | Not Available | Positive | 1939239 - 1940339 | 41969.3 |
| yijd family membrane protein | E5P00_09395 | Not Available | Negative | 1940379 - 1940738 | 13024.3 |
| hth-type transcriptional repressor fabr | E5P00_09400 | Not Available | Negative | 1940738 - 1941388 | 24536.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





