Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribulokinase | E5P00_08990 | Not Available | Positive | 1841217 - 1842917 | 61118.7 |
| l-arabinose isomerase | E5P00_08995 | Not Available | Positive | 1842928 - 1844430 | 56077.2 |
| l-ribulose-5-phosphate 4-epimerase | E5P00_09000 | Not Available | Positive | 1844545 - 1845240 | 25520.3 |
| dna polymerase ii | E5P00_09005 | Not Available | Positive | 1845315 - 1847666 | 90057.6 |
| rna polymerase-associated protein rapa | E5P00_09010 | Not Available | Positive | 1847831 - 1850737 | 109775.0 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | E5P00_09015 | Not Available | Positive | 1850749 - 1851408 | 24862.1 |
| hypothetical protein | E5P00_09025 | Not Available | Negative | 1851816 - 1851974 | 5737.08 |
| co-chaperone djla | E5P00_09035 | Not Available | Negative | 1852917 - 1853732 | 30581.2 |
| lps assembly protein lptd | E5P00_09040 | Not Available | Positive | 1853987 - 1856341 | 89675.8 |
| peptidylprolyl isomerase sura | E5P00_09045 | Not Available | Positive | 1856394 - 1857680 | 47286.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





