Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma d regulator | E5P00_08145 | Not Available | Negative | 1700768 - 1701244 | 18243.9 |
| nad(+) diphosphatase | E5P00_08150 | Not Available | Positive | 1701339 - 1702112 | 29690.6 |
| uroporphyrinogen decarboxylase | E5P00_08155 | Not Available | Positive | 1702152 - 1703216 | 39266.4 |
| deoxyribonuclease v | E5P00_08160 | Not Available | Positive | 1703226 - 1703897 | 24673.9 |
| duf416 family protein | E5P00_08165 | Not Available | Positive | 1703940 - 1704530 | 22613.9 |
| dna-binding protein hu-alpha | E5P00_08170 | Not Available | Positive | 1704717 - 1704989 | 9535.51 |
| duf1481 domain-containing protein | E5P00_08175 | Not Available | Positive | 1705002 - 1705697 | 26265.8 |
| zinc resistance sensor/chaperone zrap | E5P00_08180 | Not Available | Negative | 1705699 - 1706124 | 15200.3 |
| two-component system sensor histidine kinase zras | E5P00_08185 | Not Available | Positive | 1706362 - 1707759 | 51034.9 |
| sigma-54-dependent response regulator transcription factor zrar | E5P00_08190 | Not Available | Positive | 1707756 - 1709081 | 48397.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





