Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator gals | E5P00_07630 | Not Available | Negative | 1586602 - 1587642 | 37359.0 |
| duf418 family protein | E5P00_07635 | Not Available | Negative | 1587784 - 1588941 | 43396.2 |
| gtp cyclohydrolase i fole | E5P00_07640 | Not Available | Negative | 1588958 - 1589626 | 24832.1 |
| s-formylglutathione hydrolase yeig | E5P00_07645 | Not Available | Positive | 1589884 - 1590720 | 31260.9 |
| catecholate siderophore receptor cira | E5P00_07650 | Not Available | Negative | 1590752 - 1592743 | 73899.5 |
| lysine-specific permease | E5P00_07655 | Not Available | Negative | 1593037 - 1594506 | 53579.0 |
| lysr family transcriptional regulator | E5P00_07660 | Not Available | Negative | 1594711 - 1595592 | 32725.7 |
| glutathione s-transferase family protein | E5P00_07665 | Not Available | Negative | 1595743 - 1596360 | 23322.1 |
| l-asparagine permease | E5P00_07670 | Not Available | Positive | 1596627 - 1598126 | 54236.3 |
| ynce family protein | E5P00_07675 | Not Available | Negative | 1598239 - 1599300 | 38615.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





