Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s2 | E5P00_06920 | Not Available | Positive | 1434529 - 1435254 | 26745.2 |
| elongation factor ts | E5P00_06925 | Not Available | Positive | 1435512 - 1436363 | 30424.7 |
| ump kinase | E5P00_06930 | Not Available | Positive | 1436510 - 1437235 | 25971.9 |
| ribosome recycling factor | E5P00_06935 | Not Available | Positive | 1437527 - 1438084 | 20639.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | E5P00_06940 | Not Available | Positive | 1438176 - 1439372 | 43390.5 |
| (2e,6e)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase | E5P00_06945 | Not Available | Positive | 1439561 - 1440319 | 28314.5 |
| phosphatidate cytidylyltransferase | E5P00_06950 | Not Available | Positive | 1440332 - 1441189 | 31455.6 |
| sigma e protease regulator rsep | E5P00_06955 | Not Available | Positive | 1441201 - 1442553 | 49074.2 |
| outer membrane protein assembly factor bama | E5P00_06960 | Not Available | Positive | 1442583 - 1445015 | 90557.5 |
| molecular chaperone skp | E5P00_06965 | Not Available | Positive | 1445137 - 1445622 | 17689.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





