Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tvp38/tmem64 family protein | E5P00_05195 | Not Available | Negative | 1091631 - 1092338 | 26161.8 |
| protein ydjy | E5P00_05200 | Not Available | Negative | 1092353 - 1093030 | 24126.6 |
| tvp38/tmem64 family membrane protein ydjx | E5P00_05205 | Not Available | Negative | 1093035 - 1093745 | 26059.7 |
| exodeoxyribonuclease iii | E5P00_05210 | Not Available | Negative | 1093912 - 1094718 | 30970.9 |
| succinylornithine/acetylornithine transaminase | E5P00_05215 | Not Available | Positive | 1095164 - 1096384 | 43681.9 |
| arginine n-succinyltransferase | E5P00_05220 | Not Available | Positive | 1096381 - 1097415 | 38458.0 |
| succinylglutamate-semialdehyde dehydrogenase | E5P00_05225 | Not Available | Positive | 1097412 - 1098890 | 53034.4 |
| n-succinylarginine dihydrolase | E5P00_05230 | Not Available | Positive | 1098887 - 1100230 | 49316.3 |
| succinylglutamate desuccinylase | E5P00_05235 | Not Available | Positive | 1100223 - 1101191 | 35802.3 |
| atp-independent periplasmic protein-refolding chaperone | E5P00_05240 | Not Available | Positive | 1101521 - 1102006 | 18200.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





