Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E5P00_04695 | Not Available | Negative | 996022 - 996240 | 8011.78 |
| hydrogenase maturation nickel metallochaperone hypa | E5P00_04700 | Not Available | Positive | 996146 - 996496 | 13168.9 |
| hydrogenase nickel incorporation protein hypb | E5P00_04705 | Not Available | Positive | 996500 - 997372 | 31566.8 |
| hydrogenase 3 maturation protein hypc | E5P00_04710 | Not Available | Positive | 997363 - 997635 | 9732.58 |
| hydrogenase formation protein hypd | E5P00_04715 | Not Available | Positive | 997635 - 998756 | 41393.7 |
| hydrogenase maturation carbamoyl dehydratase hype | E5P00_04720 | Not Available | Positive | 998753 - 999763 | 35124.6 |
| formate hydrogenlyase transcriptional activator flha | E5P00_04725 | Not Available | Positive | 999837 - 1001915 | 78443.5 |
| nitrous oxide-stimulated promoter family protein | E5P00_04730 | Not Available | Negative | 1001952 - 1002305 | 13941.2 |
| hypothetical protein | E5P00_04735 | Not Available | Negative | 1002337 - 1002516 | 6742.79 |
| dna mismatch repair protein muts | E5P00_04740 | Not Available | Positive | 1002592 - 1005153 | 95296.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





