Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux mfs transporter periplasmic adaptor subunit emra | E5P00_04490 | Not Available | Positive | 956927 - 958099 | 42738.6 |
| multidrug efflux mfs transporter permease subunit emrb | E5P00_04495 | Not Available | Positive | 958116 - 959654 | 55627.7 |
| s-ribosylhomocysteine lyase | E5P00_04500 | Not Available | Negative | 959718 - 960233 | 19417.3 |
| glutamate--cysteine ligase | E5P00_04505 | Not Available | Negative | 960383 - 961939 | 58272.5 |
| deda family protein | E5P00_04510 | Not Available | Negative | 962012 - 962440 | 15590.6 |
| fructose-1-phosphate/6-phosphogluconate phosphatase | E5P00_04515 | Not Available | Negative | 962437 - 963003 | 20781.0 |
| Trna-arg | Not Available | Not Available | Positive | 963284 - 963360 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 963559 - 963635 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 963698 - 963774 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 963973 - 964049 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





