Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8124 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1137030 bp
Thymine Count
1138376 bp
Guanine Count
1175525 bp
Cytosine Count
1177288 bp
Genome Length
4628219 bp
Protein-coding Genes
4305 genes
Non-Coding Genes
153 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ytjb family periplasmic protein | E5O99_12925 | Not Available | Positive | 2699127 - 2699771 | 24084.2 |
| lipoate--protein ligase lpla | E5O99_12930 | Not Available | Positive | 2699799 - 2700815 | 37930.8 |
| type ii toxin-antitoxin system hipa family toxin yjjj | E5O99_12935 | Not Available | Negative | 2700816 - 2702147 | 49551.3 |
| purine-nucleoside phosphorylase | E5O99_12940 | Not Available | Negative | 2702314 - 2703033 | 25951.4 |
| phosphopentomutase | E5O99_12945 | Not Available | Negative | 2703090 - 2704313 | 44372.4 |
| thymidine phosphorylase | E5O99_12950 | Not Available | Negative | 2704365 - 2705687 | 47156.8 |
| deoxyribose-phosphate aldolase | E5O99_12955 | Not Available | Negative | 2705854 - 2706633 | 27779.4 |
| yjji family glycine radical enzyme | E5O99_12960 | Not Available | Positive | 2706892 - 2708442 | 58122.4 |
| yjjw family glycine radical enzyme activase | E5O99_12965 | Not Available | Positive | 2708414 - 2709277 | 31635.6 |
| metal-dependent hydrolase | E5O99_12970 | Not Available | Negative | 2709793 - 2710575 | 29032.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





