Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8124 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1137030 bp
Thymine Count
1138376 bp
Guanine Count
1175525 bp
Cytosine Count
1177288 bp
Genome Length
4628219 bp
Protein-coding Genes
4305 genes
Non-Coding Genes
153 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kdo(2)-lipid iv(a) palmitoleoyltransferase | E5O99_12665 | Not Available | Negative | 2640863 - 2641783 | 35465.4 |
| duf2545 family protein | E5O99_12670 | Not Available | Positive | 2642136 - 2642378 | 8923.5 |
| colanic acid biosynthesis lipoprotein ypdi | E5O99_12675 | Not Available | Negative | 2642455 - 2642730 | 10059.3 |
| yfdx family protein | E5O99_12680 | Not Available | Positive | 2643026 - 2643661 | 22978.5 |
| formyl-coa transferase | E5O99_12685 | Not Available | Positive | 2644173 - 2645423 | 45842.8 |
| oxalyl-coa decarboxylase | E5O99_12690 | Not Available | Positive | 2645477 - 2647171 | 60601.8 |
| transporter yfdv | E5O99_12695 | Not Available | Positive | 2647241 - 2648185 | 33617.9 |
| coa:oxalate coa-transferase | E5O99_12700 | Not Available | Positive | 2648259 - 2649404 | 41756.3 |
| acid-sensing system histidine kinase evgs | E5O99_12705 | Not Available | Negative | 2649460 - 2653053 | 134871.0 |
| acid-sensing system dna-binding response regulator evga | E5O99_12710 | Not Available | Negative | 2653058 - 2653672 | 22721.6 |
Pathways
469 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





