Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8124 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1137030 bp
Thymine Count
1138376 bp
Guanine Count
1175525 bp
Cytosine Count
1177288 bp
Genome Length
4628219 bp
Protein-coding Genes
4305 genes
Non-Coding Genes
153 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin-like protein fixx | E5O99_12200 | Not Available | Negative | 2539079 - 2539366 | 10479.5 |
| fad-dependent oxidoreductase | E5O99_12205 | Not Available | Negative | 2539363 - 2540649 | 45719.6 |
| electron transfer flavoprotein subunit alpha/fixb family protein | E5O99_12210 | Not Available | Negative | 2540700 - 2541641 | 33545.1 |
| electron transfer flavoprotein fixa | E5O99_12215 | Not Available | Negative | 2541656 - 2542426 | 27173.3 |
| l-carnitine/gamma-butyrobetaine antiporter | E5O99_12220 | Not Available | Positive | 2542900 - 2544414 | 56590.4 |
| crotonobetainyl-coa dehydrogenase | E5O99_12225 | Not Available | Positive | 2544445 - 2545587 | 42560.8 |
| l-carnitine coa-transferase | E5O99_12230 | Not Available | Positive | 2545716 - 2546933 | 45101.2 |
| crotonobetaine/carnitine-coa ligase | E5O99_12235 | Not Available | Positive | 2547007 - 2548560 | 58555.4 |
| carnitinyl-coa dehydratase | E5O99_12240 | Not Available | Positive | 2548669 - 2549454 | 28191.8 |
| carnitine operon protein caie | E5O99_12245 | Not Available | Positive | 2549460 - 2550050 | 21245.7 |
Pathways
1012 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





