Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8124 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1137030 bp
Thymine Count
1138376 bp
Guanine Count
1175525 bp
Cytosine Count
1177288 bp
Genome Length
4628219 bp
Protein-coding Genes
4305 genes
Non-Coding Genes
153 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf333 domain-containing lipoprotein yoaf | E5O99_11995 | Not Available | Negative | 2496670 - 2496924 | 8901.81 |
| diguanylate cyclase dgcp | E5O99_12000 | Not Available | Positive | 2497107 - 2498132 | 38549.8 |
| yoak family small membrane protein | E5O99_12005 | Not Available | Positive | 2498165 - 2498263 | 3458.45 |
| protein yoaj | E5O99_12010 | Not Available | Positive | 2498266 - 2498340 | 2691.57 |
| glsb/yeaq/ymge family stress response membrane protein | E5O99_12015 | Not Available | Negative | 2498399 - 2498647 | 8671.14 |
| duf1869 domain-containing protein | E5O99_12020 | Not Available | Negative | 2498795 - 2498977 | 6608.63 |
| leu operon leader peptide | E5O99_12030 | Not Available | Positive | 2499644 - 2499730 | 3146.0 |
| 2-isopropylmalate synthase | E5O99_12035 | Not Available | Positive | 2499823 - 2501394 | 57301.2 |
| 3-isopropylmalate dehydrogenase | E5O99_12040 | Not Available | Positive | 2501394 - 2502485 | 39503.2 |
| 3-isopropylmalate dehydratase large subunit | E5O99_12045 | Not Available | Positive | 2502488 - 2503888 | 49912.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





