Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8081 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1106194 bp
Thymine Count
1111053 bp
Guanine Count
1152933 bp
Cytosine Count
1144768 bp
Genome Length
4514949 bp
Protein-coding Genes
4197 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1 family transposase | E5O95_19870 | Not Available | Positive | 3985029 - 3985099 | 2357.77 |
| is1 family transposase | E5O95_19875 | Not Available | Positive | 3985100 - 3985210 | 4273.23 |
| xylulokinase | E5O95_19885 | Not Available | Negative | 3985609 - 3987063 | 52637.3 |
| xylose isomerase | E5O95_19890 | Not Available | Negative | 3987135 - 3988457 | 49721.7 |
| d-xylose abc transporter substrate-binding protein | E5O95_19895 | Not Available | Positive | 3988823 - 3989815 | 35704.0 |
| d-xylose abc transporter atp-binding protein | E5O95_19900 | Not Available | Positive | 3989893 - 3991434 | 56459.9 |
| xylose abc transporter permease xylh | E5O95_19905 | Not Available | Positive | 3991412 - 3992593 | 41033.5 |
| xylose operon transcription regulator xylr | E5O95_19910 | Not Available | Positive | 3992671 - 3993849 | 44871.7 |
| protein bax | E5O95_19915 | Not Available | Negative | 3994045 - 3994869 | 30869.3 |
| alpha-amylase | E5O95_19920 | Not Available | Positive | 3995189 - 3997219 | 75716.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





