Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8065 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1174924 bp
Thymine Count
1174449 bp
Guanine Count
1207575 bp
Cytosine Count
1219275 bp
Genome Length
4776223 bp
Protein-coding Genes
4297 genes
Non-Coding Genes
357 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isas1 family transposase | E5O92_12600 | Not Available | Negative | 2610428 - 2610772 | 13241.8 |
| sugar-binding protein | E5O92_12605 | Not Available | Negative | 2610899 - 2611222 | 12448.5 |
| hypothetical protein | E5O92_12610 | Not Available | Negative | 2611266 - 2611703 | 16603.6 |
| hypothetical protein | E5O92_12615 | Not Available | Negative | 2612008 - 2612373 | 14505.3 |
| type iv secretion protein rhs | E5O92_12620 | Not Available | Negative | 2612375 - 2617174 | 178398.0 |
| duf1795 domain-containing protein | E5O92_12625 | Not Available | Negative | 2617194 - 2617655 | 17319.4 |
| type vi secretion system tip protein vgrg | E5O92_12630 | Not Available | Negative | 2617683 - 2619584 | 71384.0 |
| cu(+)/ag(+) sensor histidine kinase cuss | E5O92_12635 | Not Available | Negative | 2620321 - 2621769 | 54135.7 |
| copper response regulator transcription factor cusr | E5O92_12640 | Not Available | Negative | 2621759 - 2622442 | 25428.2 |
| cu(+)/ag(+) efflux rnd transporter outer membrane channel cusc | E5O92_12645 | Not Available | Positive | 2622599 - 2623981 | 50714.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





