Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8065 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1174924 bp
Thymine Count
1174449 bp
Guanine Count
1207575 bp
Cytosine Count
1219275 bp
Genome Length
4776223 bp
Protein-coding Genes
4297 genes
Non-Coding Genes
357 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase sulfur acceptor subunit csde | E5O92_12545 | Not Available | Positive | 2596226 - 2596669 | 15913.1 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | E5O92_12550 | Not Available | Negative | 2596720 - 2597526 | 28534.6 |
| murein transglycosylase a | E5O92_12555 | Not Available | Negative | 2597765 - 2598862 | 40412.9 |
| Trna-met | Not Available | Not Available | Positive | 2599071 - 2599147 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 2599181 - 2599257 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 2599291 - 2599367 | Not Available |
| n-acetylmuramoyl-l-alanine amidase | E5O92_12575 | Not Available | Negative | 2599442 - 2600695 | 45637.1 |
| amino-acid n-acetyltransferase | E5O92_12580 | Not Available | Positive | 2600927 - 2602258 | 49228.2 |
| exodeoxyribonuclease v subunit alpha | E5O92_12585 | Not Available | Negative | 2602320 - 2604146 | 66807.2 |
| exodeoxyribonuclease v subunit beta | E5O92_12590 | Not Available | Negative | 2604146 - 2607688 | 134040.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





