Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8065 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1174924 bp
Thymine Count
1174449 bp
Guanine Count
1207575 bp
Cytosine Count
1219275 bp
Genome Length
4776223 bp
Protein-coding Genes
4297 genes
Non-Coding Genes
357 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose-proton symporter | E5O92_12495 | Not Available | Positive | 2585919 - 2587235 | 47547.6 |
| l-fucose isomerase | E5O92_12500 | Not Available | Positive | 2587268 - 2589043 | 64980.3 |
| l-fuculokinase | E5O92_12505 | Not Available | Positive | 2589152 - 2590570 | 52246.7 |
| l-fucose mutarotase | E5O92_12510 | Not Available | Positive | 2590572 - 2590994 | 15474.0 |
| l-fucose operon activator | E5O92_12515 | Not Available | Positive | 2591052 - 2591783 | 27363.7 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | E5O92_12520 | Not Available | Negative | 2591827 - 2592927 | 41907.5 |
| duf423 domain-containing protein | E5O92_12525 | Not Available | Negative | 2592920 - 2593315 | 14334.0 |
| transcriptional regulator gcva | E5O92_12530 | Not Available | Negative | 2593334 - 2594251 | 34393.4 |
| ygdi/ygdr family lipoprotein | E5O92_12535 | Not Available | Negative | 2594602 - 2594829 | 8174.67 |
| cysteine desulfurase csda | E5O92_12540 | Not Available | Positive | 2595021 - 2596226 | 43278.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





