Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8065 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1174924 bp
Thymine Count
1174449 bp
Guanine Count
1207575 bp
Cytosine Count
1219275 bp
Genome Length
4776223 bp
Protein-coding Genes
4297 genes
Non-Coding Genes
357 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase nickel incorporation protein hypb | E5O92_12090 | Not Available | Positive | 2497752 - 2498624 | 31566.8 |
| hydrogenase 3 maturation protein hypc | E5O92_12095 | Not Available | Positive | 2498615 - 2498887 | 9732.58 |
| hydrogenase formation protein hypd | E5O92_12100 | Not Available | Positive | 2498887 - 2500008 | 41366.7 |
| hydrogenase maturation carbamoyl dehydratase hype | E5O92_12105 | Not Available | Positive | 2500005 - 2501015 | 35096.6 |
| formate hydrogenlyase transcriptional activator flha | E5O92_12110 | Not Available | Positive | 2501089 - 2503167 | 78443.5 |
| nitrous oxide-stimulated promoter family protein | E5O92_12115 | Not Available | Negative | 2503204 - 2503557 | 13964.2 |
| dna mismatch repair protein muts | E5O92_12120 | Not Available | Positive | 2503844 - 2506405 | 95296.5 |
| protein-serine/threonine phosphatase | E5O92_12125 | Not Available | Positive | 2506511 - 2507167 | 25097.7 |
| deor/glpr transcriptional regulator | E5O92_12130 | Not Available | Negative | 2507218 - 2507985 | 27407.2 |
| nad(p)-dependent oxidoreductase | E5O92_12135 | Not Available | Positive | 2508181 - 2509089 | 30693.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





